We research on..
Cesium Accumulation
A cesium (Cs) accumulator, methyl cysteinate, led to accumulate more Cs in cells via metal binding
My Portfolio
Ryoungs Shin
Education
Bachelor of Department of Agricultural Biology, Korea University
Master of Science, Department of Agriculture Biology, Korea University
Ph. D, Graduate School of Biotechnology, Korea University
Professional Experience
Postdoc fellow, Donald Danforth Plant Science Center
Senior Research Scientist, Donald Danforth Plant Science Center
Unit leader, Plant Science Center, RIKEN
Unit leader, Center for Sustainable Resource Science, RIKEN
Assistant Professor, The university of Suwon
2020)Fellowship and Awards
Young Scientist (PI) award of Korean Society of Plant Biologists
Postdoctoral Fellowship of Korea Science and Engineering Foundation
Academic society activities
Review editor in Journal of Biological Chemistry
Editorial board member in Frontiers in Plant Science
Editorial board member in Plant Biotechnology Reports
Editorial board member in International Journal of Molecular Sciences
Editorial board member in Scientific Reports
Reviewer of a grant proposal for USDA Small Business Innovation Research Program
Research Grants
Elucidating the mechanism of plant originated phenolic compounds in plant growth improvement
Elucidating the mechanism of tannins in plant growth improvement
Developing chemical methods for removing unwanted metals from the environment using plants
Elucidating the correlation between potassium utilization and disease resistance for the improvement of rice yield using FOX (Full-length cDNA Over-eXpresser) gene-hunting system
Uptake mechanism of radioactive cesium in plants (カリウム吸収機構の改良による放射性セシウム高吸収効率植物体の開発)
Elucidating regulatory components of potassium deficient signaling (カリウム欠乏の感知・応答に関わる植物シグナル伝達因子の解明)
Roles of Arabidopsis 14-3-3 proteins in the ubiquitination dependent protein degradation pathway
The mode-of-action of 14-3-3 proteins in regulating WRKY and bHLH transcription factors
The mode-of-action of 14-3-3 proteins in regulating WRKY and bHLH transcription factors
Understanding the biological roles of 14-3-3 dimerizations in vivo
Environmental Response Research
Regulatory Network Research
Regulatory Network Research
Invited presentations
Elucidation of Arabidopsis cyclic nucleotide-gated channels contributing to heavy metal accumulation in plants
Elucidation of Arabidopsis cyclic nucleotide-gated channels contributing to heavy metal accumulation in plants
Cesium is a specific inhibitor of the AKT1-KC1 complex-mediated potassium influx in Arabidopsis
Chemical compounds aid plants to clean multiple pollutes from the environment.
Phytoremediation by elucidating chemical compounds which alter accumulation of or response to caesium in plants
A novel role for methyl cysteinate and cysteine in cesium accumulation and response in Arabidopsis
Understanding the plant response to cesium and potassium using metabolomics profiling and chemical screening
Finding chemical compounds to enhance cesium tolerance or accumulation in plants.
Molecular regulation of an Arabidopsis potassium high affinity transporter, AtHAK5.
Elucidating regulatory components of potassium deficient signaling and cesium induced signaling in Arabidopsis.
Can plants distinguish potassium and cesium; competition and cooperation?
Plant response to potassium and cesium availability: a roadmap for radioactive Cs remediation
Press Release
Abscisic acid signaling is a key to improving cesium tolerance of plants (アブシジン酸情報伝達経路は植物のセシウム耐性向上の鍵)-Science Portal Japan (2024)
Japanese newspapers: The Chemical Daily (2015), My Navy News (2015), Environmental Business (2015), Hazard lab (2015), Science Portal (2015) and Japan Economy and Engineering newspaper (2015)
NPR Radio (National Public Radio, USA, 2015) - Eat your veggies! Even the ones from Fukushima (http://www.npr.org/sections/thesalt/2015/03/05/390937138/eat-your-veggies-even-the-ones-from-fukushima),
Science Donga (Korea, 2015) (http://www.dongascience.com/news/view/6273)
Mainichi newspaper: Development of cesium optical probe (2014)
Testimonial
Prof. Ryoungs Shin
Environmental Adaptation Plant LabAndroid App Development
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Jone Duone Joe
Operating OfficerWeb App Development
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Nevine Dhawan
CEO Of OfficerAndroid App Design
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Marketing OfficerCEO - Marketing
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Chief Operating ManagerAndroid App Development
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Awesome Clients
My Pricing
Publications
1) Wen-Dee Ong, Yuko Makita, Takae Miyazaki, Minami Matsui, Ryoung Shin*. Arabidopsis transcriptomic analysis reveals cesium inhibition of root growth involves abscisic acid signaling. Planta 259, 36 https://doi.org/10.1007/s00425-023-04304-y (2024).
2) Hyeon Ji Kim, Su Min Kim, Yeon Hwa Kim, Jeong Hoon Park, Dong Ki Kang, Jae Gill Yun, Ryoung Shin, Jeum Kyu Hong. Reduced tomato bacterial wilt by ferrous chloride application. Res. Plant Dis. 29:82-89 https://doi.org/10.5423/RPD.2023.29.1.82 (2023).
3) Chang-Jin Park, Ryoung Shin*. Calcium channels and transporters: Roles in response to biotic and abiotic stresses. Front. Plant Sci. 13:964059 doi.org/10.3389/fpls.2022.964059 (2022).
4) Ju Yeon Moon, Takae Miyazaki, Makoto Muroi, Nobomoto Watanabe, Ryoung Shin*. Isolation of novel chemical components and their target proteins in plants under selenium stress. Methods Enzymol. 680: 421-438, https://doi.org/10.1016/bs.mie.2022.07.035 (2022).
5) Hyeran Moon, Young-Ah Kim, , Ryoung Shin, Chang-Jin Park. Nucleus-encoded thylakoid protein, OsY3IP1, confers enhanced tolerance to saline and alkaline stresses in rice. Rice Sci. 29:225-236, https://doi.org/10.1016/j.rsci.2021.08.004 (2022).
6) Ryoung Shin*. Book Chapter 24: Regulation of cation transports and cation homeostasis in higher plants, In Upadhyay, S.K. (eds) Cation transporters in plants, Academic Press, 437-453, doi.org/10.1016/B978-0-323-85790-1.00027-0, ISBN 9780323857901 (2022).
7) Ju Yeon Moon, Eri Adams, Takae Miyazaki, Yasumitsu Kondoh, Makoto Muroi, Nobumoto Watanabe, Hiroyuki Osada, Ryoung Shin*. Cesium tolerance is enhanced by a chemical which binds to BETA-GLUCOSIDASE 23 in Arabidopsis thaliana. Sci. Rep. 11:21109, doi.org/10.1038/s41598-021-00564-4 (2021).
8) Ryoung Shin*, Ju Yeon Moon. Selenium transport, accumulation and toxicity in plants. In: Gupta, D.K., Palma, J.M. (eds) Plant Growth and Stress Physiology. Plant in Challenging Environments, vol 3., P237-259, Springer, Cham. https://doi.org/10.1007/978-3-030-78420-1_11. Online ISBN 978-3-030-78420-1, Print ISBN 978-3-030-78419-5 (2021).
9) Takae Miyazaki, Ju Yeon Moon, Ryoung Shin*. Contribution of marine macroalgae genes to plant potassium deficiency tolerance in transgenic Arabidopsis. Plant Biotechnol. Rep. 15:349-357, doi: 10.1007/s11816-021-00680-7 (2021).
10) Amirah Mohammad-Sidik, Jian Sun, Ryoung Shin, Zhizhong Song, Youzheng Ning, Elsa Matthus, Katie A. Wilkins, Julia M. Davies. Annexin 1 is a component of eATP-induced cytosolic calcium elevation in Arabidopsis thaliana roots. Int. J. Mol. Sci. 22:494, doi: 10.3390/ijms22020494 (2021).
11) Eri Adams, Takae Miyazaki, Ju Yeon Moon, Yuji Sawada, Muneo Sato, Kiminori Toyooka, Masami Yokota Hirai, Ryoung Shin*. Syringic acid alleviates cesium-induced growth defect in Arabidopsis. Int. J. Mol. Sci. 21:9116, doi: 0.3390/ijms21239116 (2020).
12) Eri Adams, Takae Miyazaki, Shunsuke Watanabe, Naoko Ohkama-Ohtsu, Mitsunori Seo, Ryoung Shin*. Glutatione and its biosynthetic intermediates alleviate cesium stress in Arabidopsis. Front. Plant Sci. 10:1711, doi: 10.3389/fpls.2019.01711 (2020).
13) Ju Yeon Moon, Celestine Belloeil, Madeline Louise Ianna, Ryoung Shin*. Arabidopsis CNGC family members contribute to heavy metal ion uptake in plants. Int. J. Mol. Sci. 20:413, doi: 10.3390/ijms20020413 (2019).
14) Eri Adams, Takae Miyazaki, Ryoung Shin*. Contribution of KUPs to potassium and cesium accumulation appears complementary in Arabidopsis. Plant Signal Behav. 14(1):1554468, doi: 10.1080/15592324.2018.1554468 (2019).
15) Eri Adams, Takae Miyazaki, Shunya Saito, Nobuyuki Uozumi, Ryoung Shin*. Cesium inhibits plant growth primarily through reduction of potassium influx and accumulation in Arabidopsis. Plant Cell Physiol. 60:63-76, doi: 10.1093/pcp/pcy188 (2019).
16) Eri Adams, Koji Mikami, Ryoung Shin*. Selection and functional analysis of a Pyropia yezoensis ammonium transporter PyAMT1 in potassium deficiency. J. Appl. Phycol. 29:2617-2626 (2017).
17) Hajime Takiguchi, Jong-Pil Hong, Hidetoshi Nishiyama, Makoto Hakata, Hidemitsu Nakamura, Hiroaki Ichikawa, Chang-Jin Park, Ryoung Shin*. Discovery of E3 ubiquitin ligases that alter responses to nitrogen deficiency using rice Full-length cDNA OvereXpressor (FOX)-hunting system. Plant Mol. Bio. Rep. 35:343-354 (2017).
18) Eri Adams, Takae Miyazaki, Aya Hayaishi-Satoh, Minwoo Han, Miyako Kusano, Himanshu Khandelia, Kazuki Saito, Ryoung Shin*. A novel role of methyl cysteinate and cysteine in cesium accumulation and response in Arabidopsis thaliana. Sci. Rep. 7:43170; doi: 10.1038/srep43170 (2017).
19) Jong-Pil Hong, Eri Adams, Yuki Yanagawa, Minami Matsui, Ryoung Shin*. AtSKIP18 and AtSKIP31, F-box subunits of the SCF E3 ubiquitin ligase complex, mediate the degradation of 14-3-3 proteins in Arabidopsis. Biochem, Biophysic. Res. Commun. 485:174-180 (2017).
20) Ryoung Shin*, Eri Adams. Impact of cesium on plants and the environment; Cesium uptake in plants: Mechanism, regulation and application for phytoremediation, Springer, P101-124. doi: 10.1007/978-3-319-41525-3_6 (2016). 978-3-319-41524-6
21) Ryoung Shin*. Plant macro-nutrient use efficiency: molecular and genomic perspective; Chapter 8: Potassium sensing, signaling and transport: toward improved potassium use efficiency in plants, pp 149-163, https://doi.org/10.1016/B978-0-12-811308-0.00008-9, ISBN 978-0-12-811308-0, Elsevier Book (2017).
22) Eri Adams, Vitaly Chanban, Himanshu Khandelia, Ryoung Shin*. Selective chemical binding enhances cesium tolerance in plants through inhibition of cesium uptake. Sci. Rep. 5:8842 (2015).
23) Eri Adams, Celine Diaz, Jong-Pil Hong, Ryoung Shin*. 14-3-3 proteins participate in light signalling through association with PHYTOCHROME INTERACTING FACTORs. Int. J. Mol. Sci. 15:22801-22814 (2014).
24) Masaaki Akamatsu, Hirokazu Komatsu, Taizo Mori, Eri Adams, Ryoung Shin, Hideki Sakai, Masahiko Abe, Jonathan P. Hill, Katsuhiko Ariga. Intracellular Imaging of cesium distribution in Arabidopsis using cesium green. ACS Appl. Mater. Inter. 6:8208-8211 (2014).
25) Ryoung Shin*. Strategies for improving for potassium use efficiency in plants. Mol. Cells. 37:575-584 (2014).
26) Eri Adams, Celine Diaz, Minami Matsui, Ryoung Shin*. Overexpression of a novel component induces HAK5 and enhances growth in Arabidopsis. ISRN Bot. 490252, 9: doi: 10.1155/2014/490252 (2014).
27) Eri Adams, Ryoung Shin*. Transport, signaling, and homeostasis of potassium and sodium in plants. J. Integr. Plant Biol. 56:231 – 249 (2014).
28) Jong-Pil Hong, Yoshizumi Takeshi, Youichi Kondou, Daniel P. Schachtman, Minami Matsui, Ryoung Shin*. Identification and characterization of transcription factors regulating Arabidopsis HAK5. Plant Cell Physiol. 54:1478-1490 (2013).
29) Eri Adams, Parisa Abdollahi, Ryoung Shin*. Cesium inhibits plant growth through jasmonate signalling in Arabidopsis thaliana. Int. J. Mol. Sci. 14:4545-4559; doi:10.3390/ijms14034545 (2013).
30) Youn Jeong Nam, Lam-Son Phan Tran, Rie Nishiyama, Mikiko Kojima, Hitoshi Sakakibara, Ryoung Shin*. Regulatory roles of cytokinins and cytokinin signaling in response to potassium deficiency in Arabidopsis. PLOS One 7(10):e47797 (2012).
31) Min Jung Kim, Daniel Ruzicka, Ryoung Shin, Daniel P. Schachtman. The Arabidopsis AP2/ERF transcription factor RAP2.11 modulates plant response to low nutrient conditions. Mol. Plant 5:1042-1057 (2012).
32) Celine Diaz, Miyako Kusano, Ronan Sulpice, Araki Mitsutaka, Henning Redestig, Kazuki Saito, Mark Stitt, Ryoung Shin*. Determining novel functions of Arabidopsis 14-3-3 proteins in central metabolic processes. BMC Systems Biol. 5:192 (2011).
33) Vadim Demidchik, Zhonglin Shang, Ryoung Shin, Sergey Shabala, Julia M. Davies. Receptor-like activity evoked by extracellular ADP in Arabidopsis thaliana root epidermal plasma membrane. Plant Physiol. 156:1375-1385 (2011).
34) Ryoung Shin*. Transcriptional regulatory components responding to macronutrient limitation. J. Plant Biol. 54:286-293 (2011) (Review paper).
35) Ryoung Shin*, Joseph M. Jez, Amarjit Basra, Bei Zhang, Daniel P. Schachtman. 14-3-3 Proteins fine-tune plant nutrient metabolism. FEBS Lett. 585:143-147 (2011).
36) Min Jung Kim, Ryoung Shin, Daniel P. Schachtman. A nuclear factor regulates abscisic acid responses in Arabidopsis. Plant Physiol. 151:1433-1445 (2009).
37) Jiyul Jung, Ryoung Shin, Daniel P. Schachtman. Ethylene mediates plant response and tolerance to potassium deprivation. Plant Cell 21:607-621 (2009).
38) Vadim Demidchik#, Zhonglin Shang#, Ryoung Shin#, Elinor Thompson, Lourdes Rubio, Stephen Chivasa, Antoni R. Slabas, Beverley J. Glover, Daniel P. Schachtman, Sergey N. Shabala, Julia M. Davies. Plant extracellular ATP signaling by plasma membrane NADPH oxidase and Ca2+ channels. Plant J. 58:903-913 (2009). (# co-first authors)
39) Zhi Qi, Corrina R. Hampton, Ryoung Shin, Bronwyn J. Barkla, Philip J. White, Daniel P. Schachtman. The high affinity K+ transporter AtHAK5 plays a physiological role in planta at very low K+ concentrations and provides a caesium uptake pathway in Arabidopsis. J. Exp. Bot. 59: 595 – 607 (2008).
40) Ryoung Shin, Adrien Y. Burch, Kari A. Huppert, Shiv B. Tiwari, Angus S. Murphy, Tom J. Guilfoyle, Daniel P. Schachtman. The Arabidopsis transcription factor MYB77 modulates auxin signal transduction. Plant Cell 19:2440-2453 (2007). (Selected by Faculty of 1000)
41) Daniel P. Schachtman, Ryoung Shin. Nutrient sensing and signaling:NPKS. Annu. Rev. Plant Biol. 58:47-69 (2007) (Review paper).
42) Ryoung Shin, Sophie Alvarez, Adrien Y. Burch, Joseph M. Jez, Daniel P. Schachtman. Phosphoproteomic identification of targets of the Arabidopsis sucrose nonfermenting-like kinase SnRK2.8 reveals a connection to metabolic processes. Proc. Natl. Acad. Sci. U.S.A. 104:6460-6465 (2007).
43) Christopher Davies, Ryoung Shin, Weihong Liu, Mark R. Thomas, Daniel P. Schachtman. Transporters expressed during grape berry (Vitis vinifera L.) development are associated with an increase in berry size and berry potassium accumulation. J. Exp. Bot. 37:3209-3216 (2006).
44) Ryoung Shin, R. Howard Berg, Daniel P. Schachtman. Reactive oxygen species and root hairs in Arabidopsis root response to nitrogen, phosphorus and potassium deficiency. Plant Cell Physiol. 46:1350 – 1357 (2005).
45) Ryoung Shin, Daniel P. Schachtman. Hydrogen peroxide mediates plant root cell signaling in response to potassium deprivation. Proc. Natl. Acad. Sci U.S.A. 101:8827-8832 (2004). (Selected by Faculty of 1000)
46) Ryoung Shin, Jong-Min An, Chang-Jin Park, Young Jin Kim, Sunjoo Joo, Woo Taek Kim, Kyung-Hee Paek. CaTin1 (Capsicum annuum TMV-induced clone 1) expression perturbation alters the plant’s response to ethylene and interferes with redox homeostasis. Plant Physiol. 135:561-573 (2004).
47) Sung-ju Ahn, Ryoung Shin, Daniel P. Schachtman. Expression of KUP/HAK/KT genes in Arabidopsis and the role of root hairs in K+ uptake. Plant Physiol. 134:1135-1145 (2004).
48) Chang-Jin Park, Ki-Jeong Kim, Ryoung Shin, Jeong Mee Park, Kyung-Hee Paek. Pathogenesis-related protein 10 isolated from hot pepper functions as a ribonuclease in an antiviral pathway. Plant J. 37:186-198 (2004).
49) Sunita Ramesh, Ryoung Shin, David J. Eide, Daniel P. Schachtman. Differential metal selectivity and gene expression of two zinc transporter from rice. Plant Physiol. 133:126-134 (2003).
50) Ryoung Shin, Chang-Jin Park, Jong-Min Ahn, Kyung-Hee Paek. A novel TMV-induced hot pepper cell wall protein gene (CaTin2) is associated with virus-specific hypersensitive response pathway. Plant Mol. Biol. 51:687-701 (2003).
51) Ryoung Shin, Min Jung Kim, Kyung-Hee Paek. The CaTin1 (Capsicum annuum TMV-induced clone 1) and CaTin1-2 genes are linked head-to-head and share a bidirectional promoter. Plant Cell Physiol. 44:549-554 (2003).
52) Ryoung Shin, Jeong Mee Park, Jong-Min An, Kyung-Hee Paek. Ectopic expression of Tsi1 in transgenic hot pepper plants enhances host resistance to viral, bacterial and oomycete pathogens. Mol. Plant Microbe Interact. 15:983-989 (2002).
53) Ryoung Shin, Jung-Heon Han, Gil-Je Lee, Kyung-Hee Paek. The potential use of a viral coat protein gene as a transgenic screening marker and multiple virus resistance of pepper plants coexpressing coat proteins of cucumber mosaic virus and tomato mosaic virus. Transgenic Res. 11:215-219 (2002).
54) Chang-Jin Park, Ryoung Shin, Jeong Mee Park, Gil-Je Lee, Jin-Sam You, Kyung-Hee Paek. Induction of pepper cDNA encoding a lipid transfer protein during the resistance response to tobacco mosaic virus. Plant Mol. Biol. 48:243-254 (2002).
55) Jeong Mee Park, Chang-Jin Park, Suk-Bae Lee, Byung-Kook Ham, Ryoung Shin, Kyung-Hee Paek. Overexpression of the tobacco Tsi1 gene encoding an EREBP/AP2-type transcription factor enhances resistance against pathogen attack and osmotic stress in tobacco. Plant Cell 13:1035-1046 (2001).
56) Ryoung Shin, Gil-Je Lee, Chang-Jin Park, Tae-Yeon Kim, Jin-Sam You, Young-Woo Nam, Kyung-Hee Paek. Isolation of pepper mRNAs differentially expressed during the hypersensitive response to tobacco mosaic virus and characterization of a proteinase inhibitor gene. Plant Sci.161:727-737 (2001).
57) Ryoung Shin, Chang-Jin Park, Kyung-Hee Paek. A translation elongation factor 1A (CaEF1A) gene from hot pepper is induced by tobacco mosaic virus and wounding. J. Plant Biol. 44:199-204 (2001).
Patents
1) Kyung-Hee Paek, Ryoung Shin, Jong-Min Ahn, Chang-Jin Park (2005) The transgenic plant expressing hot pepper root specific genes. Korea, Patent No. 0528492
2) Kyung-Hee Paek, Ryoung Shin, Min Jeong Kim (2005) The CaTin1 and CaTin1-2 genes are linked head-to-head and share a bidirectional promoter. Korea, Patent No. 0489008
3) Kyung-Hee Paek, Ryoung Shin, Chang-Jin Park, Jong-Min Ahn (2005) A novel TMV-induced hot pepper cell wall protein gene is associated with virus-specific hypersensitive response pathway. Korea, Patent No. 0489009
5) Kyung-Hee Paek, Ryoung Shin, Chang-Jin Park, Ki-Jeong Kim (2005) Pathogenesis-related protein 10 isolated from hot pepper functions as a ribonuclease in an antiviral pathway. Korea, Patent No.0538975
6) Kyung-Hee Paek, Jeong Mee Park, Ryoung Shin, Byung-Kook Ham, Chang-Jin Park. Sang-Hyun Nam, Seil Jun (2004) Novel recombinant bacterial strain introduced with tobacco Tsi1 gene. Korea, Patent No. 0423262
7) Kyung-Hee Paek, Jeong Mee Park, Ryoung Shin, Byung-Kook Ham, Chang-Jin Park. Sang-Hyun Nam, Seil Jun (2004) Tobacco Tsip1 transformed tobacco plants and agrobacterium introduced Tsip1. Korea, Patent No. 0447813
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Ryoungs Shin
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